SMARTer Stranded Total RNA Sample Prep Kit - HI MammalianÀº 100ng - 1ugÀÇ mammalian Total RNA·ÎºÎÅÍ Illumina¿ë sequencing
library¸¦ ºü¸¥ ½Ã°£ ³»¿¡ Á¦ÀÛÇÒ ¼ö ÀÖ´Ù. º» Á¦Ç°Àº Total RNAÀÇ 90%¸¦ ÀÌ·ç´Â ribosomal RNA (rRNA)¸¦ Á¦°Å¸¦ À§ÇÑ
RiboGone (Code 634846)°ú
SMARTer ±â¼úÀÌ Àû¿ëµÇ¾î ÀÖ¾î Total RNA·ÎºÎÅÍ ¾à 5½Ã°£¸¸¿¡ rRNA depletion°ú strand-specific RNA-Seq library¸¦ Á¦ÀÛÇÒ ¼ö ÀÖ´Ù.
SMARTer Stranded Total RNA Sample Prep Kit - HI MammalianÀº ÀϹÝÀûÀÎ ¾ç (High-input, >100 ng)À» °¡Áø RNA·ÎºÎÅÍ 5½Ã°£¸¸¿¡
Illumina specific, indexed RNA Seq library¸¦ Á¦ÀÛÇÏ´Â Á¦Ç°À¸·Î, 12°³ÀÇ Reverse primer¿Í 8°³ÀÇ Forward primer¸¦ Æ÷ÇÔÇÏ°í ÀÖ¾î
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¹Ì·®ÀÇ »ùÇÃ(Low input, 100 pg- 100 ng)ÀÇ total RNA »ùÇÃÀ» ÀÌ¿ëÇÏ´Â °æ¿ì, SMARTer Stranded Total RNA Sample Prep Kit - Low Input Mammalian (Code 634861)À» ±ÇÀåÇÑ´Ù.
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- Strand information - Identify each transcript¡¯s strand of origin with >99% accuracy.
- Fast, streamlined protocol - Go from start to finish in ~5 hours.
- Large input size - Use 100 ng-1 ¥ìg total RNA from human, mouse, or rat.
- Versatility - Get reliable data across replicates and RNA quality. Seehigh - quality,
reproducible data from total RNA with a RIN (RNA IntegrityNumber) from 3-10.
- Integrated with Illuminasequencing - Generate Illumina - specificlibraries with up to
96 indexes, and retain strand information.
±×¸² 1. Flowchart of SMARTer Stranded Total RNA Sample Prep Kit - HI Mammalian library generation. Section A.
Depletion of rRNA from total RNA samples with RiboGone technology. Section B. First-strand cDNA synthesis with
SMART technology, incorporating Illumina Read Primers 1 and 2. Section C. Template switching and generation
of sequencing libraries with Illumina cluster-generating sequences and indexes by PCR amplification.
Ç¥ 1. High-quality libraries across varying levels of RNA quality. Libraries were generated from Mouse Liver
RNA by chemically shearing until it had a RIN of 3 or 7. Sequencing data showed the percentage of reads that mapped to rRNA,
exonic regions, intronic regions, intergenic regions, and the correct strand, as defined by Picard analysis.
Ç¥ 2. Sequence Alignment Metrics. 400 ng of HURR and HBRR with ERCC Spike-In RNA were treated with this kit.
Alignment data is displayed for both libraries, with the percentage of reads that mapped to rRNA, exonic regions, intronic
regions, intergenic regions, and the correct strand, as defined by Picard analysis.
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- Illumina-specific NGSlibrary generation that retains strand information
- RNA-Seq on Illuminaplatforms for mammalian samples
- Coding and non-codingtranscript information
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- SMARTer Stranded Total RNA Sample Prep Kit - HI Mammalian Components
- Indexing Primer Set HT for Illumina - 12
- SeqAmp DNA Polymerase